Mash: Fast Genome and Metagenome Distance Estimation Using MinHash.¶
Ondov, B. D., Treangen, T. J., Melsted, P., Mallonee, A. B., Bergman, N. H., Koren, S., & Phillippy, A. M. (2016). Mash: Fast Genome and Metagenome Distance Estimation Using MinHash. Genome Biology, 17.
Cited by¶
1 citation across 1 artifact.
Each citation links to the sentence it supports in the citing article.
Primes¶
- Hashing
- In biology and chemistry it is locality-sensitive hashing of DNA k-mers for genome similarity and molecular fingerprints that hash substructures so two molecules can be compared by fingerprint distance.
This sourceApplies locality-sensitive MinHash sketches to DNA k-mers, reducing genomes to short sketches whose distance estimates genome similarity.
- In biology and chemistry it is locality-sensitive hashing of DNA k-mers for genome similarity and molecular fingerprints that hash substructures so two molecules can be compared by fingerprint distance.
Verification¶
This reference passed the adversarial substantiation pipeline: it was checked to exist and to support the claim it is attached to. See how references were verified.
Registry ID ref:dd25f432533f · see in the full table